We do not present a usable clinical tool for COVID-19 diagnosis, but offer a new, efficient approach to optimize deep learning-based architectures for medical image classification purposes. For more analysis of feature selection algorithms based on the number of selected features (S.F) and consuming time, Fig. Google Scholar. In this paper, we propose an improved hybrid classification approach for COVID-19 images by combining the strengths of CNNs (using a powerful architecture called Inception) to extract features and a swarm-based feature selection algorithm (Marine Predators Algorithm) to select the most relevant features. The combination of Conv. On January 20, 2023, Japanese Prime Minister Fumio Kishida announced that the country would be downgrading the COVID-19 classification. Using X-ray images we can train a machine learning classifier to detect COVID-19 using Keras and TensorFlow. Jcs: An explainable covid-19 diagnosis system by joint classification and segmentation. Use of chest ct in combination with negative rt-pcr assay for the 2019 novel coronavirus but high clinical suspicion. 517 PDF Ensemble of Patches for COVID-19 X-Ray Image Classification Thiago Chen, G. Oliveira, Z. Dias Medicine Deep residual learning for image recognition. medRxiv (2020). Tree based classifier are the most popular method to calculate feature importance to improve the classification since they have high accuracy, robustness, and simple38. Efficient classification of white blood cell leukemia with improved swarm optimization of deep features. It also shows that FO-MPA can select the smallest subset of features, which reflects positively on performance. Sci. Stage 1: After the initialization, the exploration phase is implemented to discover the search space. Moreover, a multi-objective genetic algorithm was applied to search for the optimal features subset. Stage 2 has been executed in the second third of the total number of iterations when \(\frac{1}{3}t_{max}< t< \frac{2}{3}t_{max}\). & SHAH, S. S.H. The diagnostic evaluation of convolutional neural network (cnn) for the assessment of chest x-ray of patients infected with covid-19. COVID-19 image classification using deep features and fractional-order marine predators algorithm Authors. 4b, FO-MPA algorithm selected successfully fewer features than other algorithms, as it selected 130 and 86 features from Dataset 1 and Dataset 2, respectively. In this paper, we proposed a novel COVID-19 X-ray classification approach, which combines a CNN as a sufficient tool to extract features from COVID-19 X-ray images. A. Huang, P. et al. Lilang Zheng, Jiaxuan Fang, Xiaorun Tang, Hanzhang Li, Jiaxin Fan, Tianyi Wang, Rui Zhou, Zhaoyan Yan. 132, 8198 (2018). The second CNN architecture classifies the X-ray image into three classes, i.e., normal, pneumonia, and COVID-19. This combination should achieve two main targets; high performance and resource consumption, storage capacity which consequently minimize processing time. a cough chills difficulty breathing tiredness body aches headaches a new loss of taste or smell a sore throat nausea and vomiting diarrhea Not everyone with COVID-19 develops all of these. More so, a combination of partial differential equations and deep learning was applied for medical image classification by10. He, K., Zhang, X., Ren, S. & Sun, J. In9, to classify ultrasound medical images, the authors used distance-based FS methods and a Fuzzy Support Vector Machine (FSVM). Cancer 48, 441446 (2012). (iii) To implement machine learning classifiers for classification of COVID and non-COVID image classes. Corona Virus lung infected X-Ray Images accessible by Kaggle a complete 590 images, which classified in 2 classes: typical and Covid-19. There are three main parameters for pooling, Filter size, Stride, and Max pool. Bisong, E. Building Machine Learning and Deep Learning Models on Google Cloud Platform (Springer, Berlin, 2019). Havaei, M. et al. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. A survey on deep learning in medical image analysis. Abadi, M. et al. Al-qaness, M. A., Ewees, A. 43, 302 (2019). where \(R\in [0,1]\) is a random vector drawn from a uniform distribution and \(P=0.5\) is a constant number. 2 (left). 6, right), our approach still provides an overall accuracy of 99.68%, putting it first with a slight advantage over MobileNet (99.67 %). Memory FC prospective concept (left) and weibull distribution (right). Meanwhile, the prey moves effectively based on its memory for the previous events to catch its food, as presented in Eq. The survey asked participants to broadly classify the findings of each chest CT into one of the four RSNA COVID-19 imaging categories, then select which imaging features led to their categorization. For Dataset 2, FO-MPA showed acceptable (not the best) performance, as it achieved slightly similar results to the first and second ranked algorithm (i.e., MPA and SMA) on mean, best, max, and STD measures. 40, 2339 (2020). Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. A.A.E. Finally, the predator follows the levy flight distribution to exploit its prey location. Four measures for the proposed method and the compared algorithms are listed. In 2019 26th National and 4th International Iranian Conference on Biomedical Engineering (ICBME), 194198 (IEEE, 2019). For general case based on the FC definition, the Eq. 9, 674 (2020). Ge, X.-Y. This paper reviews the recent progress of deep learning in COVID-19 images applications from five aspects; Firstly, 33 COVID-19 datasets and data enhancement methods are introduced; Secondly, COVID-19 classification methods . The results indicate that all CNN-based architectures outperform the ViT-based architecture in the binary classification of COVID-19 using CT images. https://doi.org/10.1155/2018/3052852 (2018). Slider with three articles shown per slide. This dataset currently contains hundreds of frontal view X-rays and is the largest public resource for COVID-19 image and prognostic data, making it a necessary resource to develop and evaluate tools to aid in the treatment of CO VID-19. For example, Lambin et al.7 proposed an efficient approach called Radiomics to extract medical image features. The lowest accuracy was obtained by HGSO in both measures. COVID-19 tests are currently hard to come by there are simply not enough of them and they cannot be manufactured fast enough, which is causing panic. The authors declare no competing interests. PubMedGoogle Scholar. Table3 shows the numerical results of the feature selection phase for both datasets. MPA simulates the main aim for most creatures that is searching for their foods, where a predator contiguously searches for food as well as the prey. The proposed IMF approach successfully achieves two important targets, selecting small feature numbers with high accuracy. So, based on this motivation, we apply MPA as a feature selector from deep features that produced from CNN (largely redundant), which, accordingly minimize capacity and resources consumption and can improve the classification of COVID-19 X-ray images. Mutation: A mutation refers to a single change in a virus's genome (genetic code).Mutations happen frequently, but only sometimes change the characteristics of the virus. The evaluation showed that the RDFS improved SVM robustness against reconstruction kernel and slice thickness. Aiming at the problems of poor attention to existing translation models, the insufficient ability of key transfer and generation, insufficient quality of generated images, and lack of detailed features, this paper conducts research on lung medical image translation and lung image classification based on . all above stages are repeated until the termination criteria is satisfied. The definitions of these measures are as follows: where TP (true positives) refers to the positive COVID-19 images that were correctly labeled by the classifier, while TN (true negatives) is the negative COVID-19 images that were correctly labeled by the classifier. They also used the SVM to classify lung CT images. Imaging 35, 144157 (2015). }\delta (1-\delta )(2-\delta ) U_{i}(t-2)\\&\quad + \frac{1}{4! While, MPA, BPSO, SCA, and SGA obtained almost the same accuracy, followed by both bGWO, WOA, and SMA. arXiv preprint arXiv:2004.05717 (2020). While55 used different CNN structures. In this paper, we try to integrate deep transfer-learning-based methods, along with a convolutional block attention module (CBAM), to focus on the relevant portion of the feature maps to conduct an image-based classification of human monkeypox disease. Remainder sections are organized as follows: Material and methods sectionpresents the methodology and the techniques used in this work including model structure and description. 7, most works are pre-prints for two main reasons; COVID-19 is the most recent and trend topic; also, there are no sufficient datasets that can be used for reliable results. This study aims to improve the COVID-19 X-ray image classification using feature selection technique by the regression mutual information deep convolution neuron networks (RMI Deep-CNNs). Mirjalili, S. & Lewis, A. Generally, the most stable algorithms On dataset 1 are WOA, SCA, HGSO, FO-MPA, and SGA, respectively. TOKYO, Jan 26 (Reuters) - Japan is set to downgrade its classification of COVID-19 to that of a less serious disease on May 8, revising its measures against the coronavirus such as relaxing. Table2 depicts the variation in morphology of the image, lighting, structure, black spaces, shape, and zoom level among the same dataset, as well as with the other dataset. Da Silva, S. F., Ribeiro, M. X., Neto, Jd. Expert Syst. FC provides a clear interpretation of the memory and hereditary features of the process. These datasets contain hundreds of frontal view X-rays and considered the largest public resource for COVID-19 image data. Its structure is designed based on experts' knowledge and real medical process. Heidari, A. Brain tumor segmentation with deep neural networks. New Images of Novel Coronavirus SARS-CoV-2 Now Available NIAID Now | February 13, 2020 This scanning electron microscope image shows SARS-CoV-2 (yellow)also known as 2019-nCoV, the virus that causes COVID-19isolated from a patient in the U.S., emerging from the surface of cells (blue/pink) cultured in the lab. & Cao, J. The \(\delta\) symbol refers to the derivative order coefficient. Initialization phase: this phase devotes for providing a random set of solutions for both the prey and predator via the following formulas: where the Lower and Upper are the lower and upper boundaries in the search space, \(rand_1\) is a random vector \(\in\) the interval of (0,1). Then the best solutions are reached which determine the optimal/relevant features that should be used to address the desired output via several performance measures. ISSN 2045-2322 (online). Sci Rep 10, 15364 (2020). Softw. Improving the ranking quality of medical image retrieval using a genetic feature selection method. Also, it has killed more than 376,000 (up to 2 June 2020) [Coronavirus disease (COVID-2019) situation reports: (https://www.who.int/emergencies/diseases/novel-coronavirus-2019/situation-reports/)]. Afzali, A., Mofrad, F.B. As seen in Fig. Our results indicate that the VGG16 method outperforms . & Dai, Q. Discriminative clustering and feature selection for brain mri segmentation. Inf. Software available from tensorflow. We can call this Task 2. Google Scholar. and A.A.E. 95, 5167 (2016). Yousri, D. & Mirjalili, S. Fractional-order cuckoo search algorithm for parameter identification of the fractional-order chaotic, chaotic with noise and hyper-chaotic financial systems. Can ai help in screening viral and covid-19 pneumonia? COVID-19 (coronavirus disease 2019) is a new viral infection disease that is widely spread worldwide. According to the formula10, the initial locations of the prey and predator can be defined as below: where the Elite matrix refers to the fittest predators. where \(REfi_{i}\) represents the importance of feature i that were calculated from all trees, where \(normfi_{ij}\) is the normalized feature importance for feature i in tree j, also T is the total number of trees. Chowdhury, M.E. etal. Netw. CNNs are more appropriate for large datasets. Also, in58 a new CNN architecture called EfficientNet was proposed, where more blocks were added on top of the model after applying normalization of images pixels intensity to the range (0 to 1). Design incremental data augmentation strategy for COVID-19 CT data. Convolutional neural networks were implemented in Python 3 under Google Colaboratory46, commonly referred to as Google Colab, which is a research project for prototyping machine learning models on powerful hardware options such as GPUs and TPUs. Sign up for the Nature Briefing newsletter what matters in science, free to your inbox daily. Besides, the binary classification between two classes of COVID-19 and normal chest X-ray is proposed. For the special case of \(\delta = 1\), the definition of Eq. Based on Standard Deviation measure (STD), the most stable algorithms were SCA, SGA, BPSO, and bGWO, respectively. Moreover, from Table4, it can be seen that the proposed FO-MPA provides better results in terms of F-Score, as it has the highest value in datatset1 and datatset2 which are 0.9821 and 0.99079, respectively. (4). E. B., Traina-Jr, C. & Traina, A. J. Med. Figure3 illustrates the structure of the proposed IMF approach. Med. 41, 923 (2019). The results of max measure (as in Eq. Moreover, the \(R_B\) parameter has been changed to depend on weibull distribution as described below. Generally, the proposed FO-MPA approach showed satisfying performance in both the feature selection ratio and the classification rate. layers is to extract features from input images. They applied a fuzzy decision tree classifier, and they found that fuzzy PSO improved the classification accuracy. Computed tomography (CT) and magnetic resonance imaging (MRI) represent valuable input to AI algorithms, scanning human body sections for the sake of diagnosis. I am passionate about leveraging the power of data to solve real-world problems. Isolation and characterization of a bat sars-like coronavirus that uses the ace2 receptor. This stage can be mathematically implemented as below: In Eq. }\delta (1-\delta )(2-\delta )(3-\delta ) U_{i}(t-3) + P.R\bigotimes S_i. 111, 300323. Abbas, A., Abdelsamea, M.M. & Gaber, M.M. Classification of covid-19 in chest x-ray images using detrac deep convolutional neural network. Simonyan, K. & Zisserman, A. Also, they require a lot of computational resources (memory & storage) for building & training. Comparison with other previous works using accuracy measure. & Zhu, Y. Kernel feature selection to fuse multi-spectral mri images for brain tumor segmentation. The first one is based on Python, where the deep neural network architecture (Inception) was built and the feature extraction part was performed. Johnson, D.S., Johnson, D. L.L., Elavarasan, P. & Karunanithi, A. Also, in12, an Fs method based on SVM was proposed to detect Alzheimers disease from SPECT images. For both datasets, the Covid19 images were collected from patients with ages ranging from 40-84 from both genders. Med. HIGHLIGHTS who: Yuan Jian and Qin Xiao from the Fukuoka University, Japan have published the Article: Research and Application of Fine-Grained Image Classification Based on Small Collar Dataset, in the Journal: (JOURNAL) what: MC-Loss drills down on the channels to effectively navigate the model, focusing on different distinguishing regions and highlighting diverse features. Sahlol, A. T., Kollmannsberger, P. & Ewees, A. Early diagnosis, timely treatment, and proper confinement of the infected patients are some possible ways to control the spreading of . Biomed. 4 and Table4 list these results for all algorithms. So some statistical operations have been added to exclude irrelevant and noisy features, and by making it more computationally efficient and stable, they are summarized as follows: Chi-square is applied to remove the features which have a high correlation values by computing the dependence between them. The code of the proposed approach is also available via the following link [https://drive.google.com/file/d/1-oK-eeEgdCMCnykH364IkAK3opmqa9Rvasx/view?usp=sharing]. To address this challenge, this paper proposes a two-path semi- supervised deep learning model, ssResNet, based on Residual Neural Network (ResNet) for COVID-19 image classification, where two paths refer to a supervised path and an unsupervised path, respectively. For the exploration stage, the weibull distribution has been applied rather than Brownian to bost the performance of the predator in stage 2 and the prey velocity in stage 1 based on the following formula: Where k, and \(\zeta\) are the scale and shape parameters. Automated detection of alzheimers disease using brain mri imagesa study with various feature extraction techniques. Methods: We employed a public dataset acquired from 20 COVID-19 patients, which . By filtering titles, abstracts, and content in the Google Scholar database, this literature review was able to find 19 related papers to answer two research questions, i.e. Dhanachandra and Chanu35 proposed a hybrid method of dynamic PSO and fuzzy c-means to segment two types of medical images, MRI and synthetic images. Zhang et al.16 proposed a kernel feature selection method to segment brain tumors from MRI images. COVID-19 image classification using deep features and fractional-order marine predators algorithm. Classification of COVID-19 X-ray images with Keras and its potential problem | by Yiwen Lai | Analytics Vidhya | Medium Write Sign up 500 Apologies, but something went wrong on our end.. A combination of fractional-order and marine predators algorithm (FO-MPA) is considered an integration among a robust tool in mathematics named fractional-order calculus (FO). ADS Scientific Reports Volume 10, Issue 1, Pages - Publisher. COVID-19 image classification using deep features and fractional-order marine predators algorithm, $$\begin{aligned} \chi ^2=\sum _{k=1}^{n} \frac{(O_k - E_k)^2}{E_k} \end{aligned}$$, $$\begin{aligned} ni_{j}=w_{j}C_{j}-w_{left(j)}C_{left(j)}-w_{right(j)}C_{right(j)} \end{aligned}$$, $$\begin{aligned} fi_{i}=\frac{\sum _{j:node \mathbf \ {j} \ splits \ on \ feature \ i}ni_{j}}{\sum _{{k}\in all \ nodes }ni_{k}} \end{aligned}$$, $$\begin{aligned} normfi_{i}=\frac{fi_{i}}{\sum _{{j}\in all \ nodes }fi_{j}} \end{aligned}$$, $$\begin{aligned} REfi_{i}=\frac{\sum _{j \in all trees} normfi_{ij}}{T} \end{aligned}$$, $$\begin{aligned} D^{\delta }(U(t))=\lim \limits _{h \rightarrow 0} \frac{1}{h^\delta } \sum _{k=0}^{\infty }(-1)^{k} \begin{pmatrix} \delta \\ k\end{pmatrix} U(t-kh), \end{aligned}$$, $$\begin{aligned} \begin{pmatrix} \delta \\ k \end{pmatrix}= \frac{\Gamma (\delta +1)}{\Gamma (k+1)\Gamma (\delta -k+1)}= \frac{\delta (\delta -1)(\delta -2)\ldots (\delta -k+1)}{k! 2 (right). An efficient feature generation approach based on deep learning and feature selection techniques for traffic classification. Thereafter, the FO-MPA parameters are applied to update the solutions of the current population. To further analyze the proposed algorithm, we evaluate the selected features by FO-MPA by performing classification. Sahlol, A.T., Yousri, D., Ewees, A.A. et al. Feature selection using flower pollination optimization to diagnose lung cancer from ct images. Evaluate the proposed approach by performing extensive comparisons to several state-of-art feature selection algorithms, most recent CNN architectures and most recent relevant works and existing classification methods of COVID-19 images. Figure7 shows the most recent published works as in54,55,56,57 and44 on both dataset 1 and dataset 2. In Proceedings of the IEEE Conference on Computer Vision and Pattern Recognition12511258 (2017). Image Underst. In ancient India, according to Aelian, it was . All classication models ever, the virus mutates, and new variants emerge and dis- performed better in classifying the Non-COVID-19 images appear. Blog, G. Automl for large scale image classification and object detection. Inception architecture is described in Fig. Cite this article. They employed partial differential equations for extracting texture features of medical images. where CF is the parameter that controls the step size of movement for the predator.
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